I'm sure sorry for the damaged RV issues discussed above. I too had some damage from a rubber roof late in 2015, but I was very lucky and caught it very early when the damage was just to the luan. My issue was not failed caulking or lack of proper maintenance, it was a failure of the rubber membrane and water was leaking through it.
My solution was not cheap, but then a new rubber roof isn't either and both options are much better than a new RV when your old one is basically salvage value. But why would you want to spend a lot of money on a new rubber roof and expect different results the second time and you still have issues with caulking?
My solution was
This. It was done in January 2016 and I have never been happier and it was just a hair more expensive than a rubber roof and that was due to the luan that had to be replaced. And the install took 2 1/2 days vs a month as quoted my dealer.
PM me for more specific details.