Our 2019 2500RL GD has been in storage for almost a year. We just brought it home in preparation for a trip. I noticed the roof is in decent shape, however there are strips that are darker. I guess this is where the roof trusses are?
Probably the dark strips are caused by condensation forming along the roof trusses. They will stay damp longer than the rest of the roof and attract more dirt/dust than the roof.
Murphy's oil soap is often used on RV rubber roofs. There are other products available. When you wash/scrub the roof you are removing some of the white coating.